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Organizing biological data
Poolseq to test for genic capture of SNP variants for pathogen infection by sexual selection in Drosophila melanogaster
ECM composition dictates the mode of cell competition and competence for tumor initiation
Comparative Metagenomic Analysis of Bacteriophages in Common Gnotobiotic Mouse Models
winner&loser
Single cell RNAseq of murine gliomas induced by PDGFB overexpression
Bulk RNAseq of murine gliomas driven by overexpression of PDGFB
RNA sequencing of winner and loser hPSCs grown in either separate culture or upon co-culture.
Tunable dynamics of B cell clonal selection in gut-associated germinal centers.
aquifer metagenome
Metagenome from the Muhlbacher Schwefelquelle aquifer
Metagenomics study of Ravindra Kala Bhavan - Heritage Building of University College at Mangaluru
Distinct modes of cell competition shape mammalian tissue morphogenesis
In Vivo Profiling of Leukemic Stem Cell Fitness
Mus musculus
Screening of cell competition genes
Effects of thermal stress on coral microbiome
Salinibacter ruber strain:M1 | isolate:Salinibacter ruber M1
Salinibacter ruber strain:M1 | isolate:Salinibacter ruber M1 Genome sequencing and assembly
VEX1 ChIP-Seq
ChIP-Seq analysis of Myc-tagged VEX1
Staphylococcus aureus strain:L401
Staphylococcus aureus strain:L401 Genome sequencing and assembly
VEX1/VEX2/CAF-1 RNA-seq in T. brucei
RNA-seq following knockdown of VEX2, VEX1/VEX2 or CAF-1b
Marine viruses discovered through metagenomics shed light on viral strategies throughout the oceans
Despite their increasingly recognized influence over marine ecosystems, little of the genetic diversity of marine viruses has been charted. Metagenomics has proved to be a powerful culturing independent approach for the discovery of novel viral genomes. Through this approach, we obtained a dataset of genomic sequences derived from highly abundant members of oceanic viral communities that belong to completely novel evolutionary lineages. These viruses are predicted to infect bacteria that are dominant across marine habitats. Exploring the distribution profile of the newly discovered viruses allowed us to better understand how the composition of viral communities throughout the oceans shifts to exploit the microbes that they infect according to the abundance of their hosts and environmental conditions of their habitat.
Drosophila melanogaster
RNA-seq analysis of mutations inducing the loser status in Drosophila wing discs
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