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Items: 1 to 20 of 215

  • The following terms were not found in BioProject: eggc.vip, -eggc.vip-Nmd.
1.

RNA-seq analysis of AS-NMD targets in developing mouse neurons

Project data type: Other
Scope:
Monoisolate
European Bioinformatics Institute
Accession:
PRJEB63989
ID:
1118590
2.

UPF1 is required for gene expression in mitochondria and for the elimination of paternal mtDNA

Organism:
Drosophila melanogaster
Taxonomy:
Drosophila melanogaster (fruit fly)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
School of Biosciences, University of Birmingham
Accession:
PRJNA1105979
ID:
1105979
3.

UPF1 governs early B cell development through regulation of V(D)J recombination

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Department of Medical Chemistry, Kyoto University
Accession:
PRJNA1103752
ID:
1103752
4.

UPF1 regulates mRNA stability by sensing poorly translated coding sequences - siRNA HEK293 cells.

Project data type: Raw sequence reads
Scope:
Multispecies
Yale University
Accession:
PRJNA1087706
ID:
1087706
5.

UPF1 regulates mRNA stability by sensing poorly translated coding sequences - HITS-CLIP.

Project data type: Raw sequence reads
Scope:
Multispecies
Yale University
Accession:
PRJNA1087701
ID:
1087701
6.

Genome-wide effect of copper levels on nonsense mediated mRNA decay (NMD) pathway in Saccharomyces cerevisiae

Project data type: Raw sequence reads
Scope:
Multispecies
Baylor University
Accession:
PRJNA1059649
ID:
1059649
7.

UPF1 ATPase autoinhibition and activation modulate RNA binding kinetics and NMD efficiency 1

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Biochemistry and Biophysics Center, National Heart, Lung, and Blood Institute
Accession:
PRJNA1033188
ID:
1033188
8.

UPF1 ATPase autoinhibition and activation modulate RNA binding kinetics and NMD efficiency 2

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Biochemistry and Biophysics Center, National Heart, Lung, and Blood Institute
Accession:
PRJNA1033187
ID:
1033187
9.

UPF1 ATPase autoinhibition and activation modulate RNA binding kinetics and NMD efficiency

Umbrella project
Biochemistry and Biophysics Center, National Heart, Lung, and Blood Institute
Accession:
PRJNA1033186
ID:
1033186
10.

Cryptic splicing mediates genetic and therapeutic perturbation of human gene expression levels

Project data type: Raw sequence reads
Scope:
Multispecies
University of Chicago
Accession:
PRJNA1021544
ID:
1021544
11.

Caenorhabditis elegans strain:N2 wildtype | isolate:VC2010

C. elegans Nonsense-Mediated mRNA Decay Degradation Intermediates

Taxonomy:
Caenorhabditis elegans
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
University of California, Santa Cruz
Accession:
PRJNA1010807
ID:
1010807
12.
13.

BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state [MOLM13 DMSO vs dBRD9 RNA-seq]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Department of Hematology-Oncology, Foundation for Biomedical Research and Innovation at Kobe
Accession:
PRJNA993190
ID:
993190
14.

BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state [Mouse_Brd9_CTCF ChIP-seq]

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Epigenomics
Scope:
Multiisolate
Department of Hematology-Oncology, Foundation for Biomedical Research and Innovation at Kobe
Accession:
PRJNA993189
ID:
993189
15.

BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state

Umbrella project
Department of Hematology-Oncology, Foundation for Biomedical Research and Innovation at Kobe
Accession:
PRJNA993185
ID:
993185
16.

THUMPD2 catalyzes N2-methylation on the spliceosome catalytic center of U6 snRNA and regulates pre-mRNA splicing and retina degeneration

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Center for Applied Bioinformatics, St Jude Children's Research Hosipital
Accession:
PRJNA992056
ID:
992056
17.

BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state [mouse_Brd9_H3K27Ac-ChIP-seq]

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Epigenomics
Scope:
Multiisolate
Foundation for Biomedical Research and Innovation at Kobe
Accession:
PRJNA990574
ID:
990574
18.

BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state [human_Brd9_bulkRNA-seq]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Foundation for Biomedical Research and Innovation at Kobe
Accession:
PRJNA990573
ID:
990573
19.

BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state [human_Brd9_CTCF-ChIP-seq]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Epigenomics
Scope:
Multiisolate
Foundation for Biomedical Research and Innovation at Kobe
Accession:
PRJNA990572
ID:
990572
20.

BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state [human_Brd9_ATAC-seq]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Epigenomics
Scope:
Multiisolate
Foundation for Biomedical Research and Innovation at Kobe
Accession:
PRJNA990569
ID:
990569

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