rVipUrs (ID 879044) - BioProject

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Accession: PRJEB55895 ID: 879044

rVipUrs

Vipera ursinii (Hungarian meadow viper)

See Genome Information for Vipera ursinii

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This project is a component of the Vertebrate Genomes Project

This project is a component of the Sanger Institute Tree of Life Programme: Data and Assemblies

This project is a component of the The European Reference Genome Atlas Pilot Project

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441 additional projects are components of the Vertebrate Genomes Project.

120 additional projects are components of the Sanger Institute Tree of Life Programme: Data and Assemblies.

25 additional projects are components of the The European Reference Genome Atlas Pilot Project.

This project collects the sequencing data and assemblies generated for Vipera ursinii, common name Hungarian meadow viper, as part of the European Reference Genome Atlas Pilot Project (https://www.erga-biodiversity.eu/pilot-project). The data under this project are made available subject to the Tree of Life Open Data Release Policy (https://www.darwintreeoflife.org/project-resources/). The assembly is provided by the Wellcome Sanger Institute Tree of Life Programme (https://www.sanger.ac.uk/programme/tree-of-life/) in collaboration with Balint Halpern (MME BirdLife, Hungary) and the European Reference Genome Atlas Pilot Project team.

Accession	PRJEB55895
Type	Umbrella project
Organism	Vipera ursinii[Taxonomy ID: 103942] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Viperinae; Vipera; Vipera ursinii
Submission	Registration date: 10-Sep-2022 WELLCOME SANGER INSTITUTE

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	22
WGS master	2
Genomic DNA	20
SRA Experiments	4
Other datasets
BioSample	2
Assembly	2

SRA Data Details

Parameter	Value
Data volume, Gbases	248
Data volume, Mbytes	99765

rVipUrs encompasses the following 3 sub-projects:

Project Type

Number of Projects

Genome sequencing

Highest level of assembly :

Chromosomes
Scaffolds
Total

1
1
2

BioProject accession	Assembly level	Organism	Title
PRJEB57182	Scaffolds	Vipera ursinii	Vipera ursinii (Hungarian meadow viper) genome assembly, rVipUrs1, alternate haplotype (WELLCOME SANGER INSTITUTE)
PRJEB57183	Chromosomes	Vipera ursinii	Vipera ursinii (Hungarian meadow viper) genome assembly, rVipUrs1 (WELLCOME SANGER INSTITUTE)

Other

BioProject accession	Organism	Title
PRJEB55894	Vipera ursinii	Vipera ursinii (Hungarian meadow viper), genomic and transcriptomic data (WELLCOME SANGER INSTITUTE)

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rVipUrs

Vipera ursinii (Hungarian meadow viper)

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