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Accession: PRJNA640389 ID: 640389

Single-cell RNA-seq data of Arabidopsis root (thale cress)

See Genome Information for Arabidopsis thaliana
We report both raw and processed scRNA-seq data that are used to build transcriptomic atlas of Arabidopsis root. More...
AccessionPRJNA640389; GEO: GSE152766
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismArabidopsis thaliana[Taxonomy ID: 3702]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana
PublicationsShahan R et al., "A single-cell Arabidopsis root atlas reveals developmental trajectories in wild-type and cell identity mutants.", Dev Cell, 2022 Feb 4;
SubmissionRegistration date: 18-Jun-2020
Benfey Lab, Biology, Duke University
NCBI Links
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments19
Publications
PubMed1
Other datasets
BioSample19
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes302697
SRA Data Details
ParameterValue
Data volume, Gbases820
Data volume, Tbytes0.27

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