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Accession: PRJNA640371 ID: 640371

RNA-seq analysis in human REH pre-B lymphoblastic cells in response to XIST-KD (human)

See Genome Information for Homo sapiens
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We performed RNA-seq experiments to modulate levels of XIST RNA. We inhibited XIST activity in REH lymphocytic cells via knockdown of XIST expression by short hairpin (sh) RNA. More...
AccessionPRJNA640371; GEO: GSE152767
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsZhang Y et al., "Skewed allelic expression on X chromosome associated with aberrant expression of XIST on systemic lupus erythematosus lymphocytes.", Hum Mol Genet, 2020 Aug 29;29(15):2523-2534
SubmissionRegistration date: 18-Jun-2020
HudsonAlpha Institute for Biotech
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments2
Publications
PubMed1
Other datasets
BioSample2
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases13
Data volume, Mbytes4733

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