Escherichia coli (ID 639374) - BioProject

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Accession: PRJNA639374 ID: 639374

Escherichia coli

Whole-Genome Characterization of Hemolytic Uremic Syndrome-associted Shiga Toxin producing Escherichia coli in Sweden

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Whole-Genome Characterization of Hemolytic Uremic Syndrome-associted Shiga Toxin producing Escherichia coli in Sweden

Accession	PRJNA639374
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Escherichia coli[Taxonomy ID: 562] Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Publications	Hua Y et al., "Molecular characteristics of eae-positive clinical Shiga toxin-producing Escherichia coli in Sweden.", Emerg Microbes Infect, 2020 Dec;9(1):2562-2570
Submission	Registration date: 30-Nov-2020 Massey University
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	54
Publications
PubMed	1
PMC	1
Other datasets
BioSample	54
Assembly	54

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

54
54

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_015699965.1	JABWEH000000000	SAMN15234451	SEH9401	Escherichia coli
GCA_015699955.1	JABWEI000000000	SAMN15234452	SEH9501	Escherichia coli
GCA_015699925.1	JABWEJ000000000	SAMN15234453	SEH9701	Escherichia coli
GCA_015699915.1	JABWEK000000000	SAMN15234454	SEH9702	Escherichia coli
GCA_015699875.1	JABWEL000000000	SAMN15234455	SEH9703	Escherichia coli
GCA_015699885.1	JABWEM000000000	SAMN15234456	SEH9704	Escherichia coli
GCA_015699855.1	JABWEN000000000	SAMN15234457	SEH9705	Escherichia coli
GCA_015699825.1	JABWEO000000000	SAMN15234458	SEH9901	Escherichia coli
GCA_015699815.1	JABWEP000000000	SAMN15234459	SEH0201	Escherichia coli
GCA_015699755.1	JABWES000000000	SAMN15234462	SEH0302	Escherichia coli
GCA_015699785.1	JABWEQ000000000	SAMN15234460	SEH0202	Escherichia coli
GCA_015699775.1	JABWER000000000	SAMN15234461	SEH0301	Escherichia coli
GCA_015699715.1	JABWEU000000000	SAMN15234464	SEH0402	Escherichia coli
GCA_015699725.1	JABWET000000000	SAMN15234463	SEH0401	Escherichia coli
GCA_015699685.1	JABWEV000000000	SAMN15234465	SEH0403	Escherichia coli
GCA_015699665.1	JABWEX000000000	SAMN15234467	SEH0501	Escherichia coli
GCA_015699655.1	JABWEW000000000	SAMN15234466	SEH0404	Escherichia coli
GCA_015699625.1	JABWEZ000000000	SAMN15234469	SEH0503	Escherichia coli
GCA_015699615.1	JABWEY000000000	SAMN15234468	SEH0502	Escherichia coli
GCA_015699595.1	JABWFA000000000	SAMN15234470	SEH0504	Escherichia coli
GCA_015699565.1	JABWFD000000000	SAMN15234473	SEH0507	Escherichia coli
GCA_015699555.1	JABWFB000000000	SAMN15234471	SEH0505	Escherichia coli
GCA_015699515.1	JABWFE000000000	SAMN15234474	SEH0508	Escherichia coli
GCA_015699525.1	JABWFC000000000	SAMN15234472	SEH0506	Escherichia coli
GCA_015699495.1	JABWFF000000000	SAMN15234475	SEH0601	Escherichia coli
GCA_015699465.1	JABWFG000000000	SAMN15234476	SEH0602	Escherichia coli
GCA_015699455.1	JABWFH000000000	SAMN15234477	SEH0603	Escherichia coli
GCA_015699425.1	JABWFI000000000	SAMN15234478	SEH0701	Escherichia coli
GCA_015699415.1	JABWFJ000000000	SAMN15234479	SEH0702	Escherichia coli
GCA_015699395.1	JABWFK000000000	SAMN15234480	SEH0801	Escherichia coli
GCA_015699365.1	JABWFL000000000	SAMN15234481	SEH0901	Escherichia coli
GCA_015699355.1	JABWFM000000000	SAMN15234482	SEH1001	Escherichia coli
GCA_015699315.1	JABWFN000000000	SAMN15234483	SEH1002	Escherichia coli
GCA_015699295.1	JABWFP000000000	SAMN15234485	SEH1004	Escherichia coli
GCA_015699325.1	JABWFO000000000	SAMN15234484	SEH1003	Escherichia coli
GCA_015699265.1	JABWFR000000000	SAMN15234487	SEH1101	Escherichia coli
GCA_015699255.1	JABWFQ000000000	SAMN15234486	SEH1005	Escherichia coli
GCA_015699215.1	JABWFS000000000	SAMN15234488	SEH1102	Escherichia coli
GCA_015699225.1	JABWFT000000000	SAMN15234489	SEH1201	Escherichia coli
GCA_015699195.1	JABWFV000000000	SAMN15234491	SEH1203	Escherichia coli
GCA_015699165.1	JABWFU000000000	SAMN15234490	SEH1202	Escherichia coli
GCA_015699145.1	JABWFW000000000	SAMN15234492	SEH1301	Escherichia coli
GCA_015699135.1	JABWFY000000000	SAMN15234494	SEH1402	Escherichia coli
GCA_015699115.1	JABWFX000000000	SAMN15234493	SEH1401	Escherichia coli
GCA_015699095.1	JABWFZ000000000	SAMN15234495	SEH1403	Escherichia coli
GCA_015699065.1	JABWGC000000000	SAMN15234498	SEH1406	Escherichia coli
GCA_015699055.1	JABWGD000000000	SAMN15234499	SEH1407	Escherichia coli
GCA_015699025.1	JABWGA000000000	SAMN15234496	SEH1404	Escherichia coli
GCA_015699015.1	JABWGB000000000	SAMN15234497	SEH1405	Escherichia coli
GCA_015698965.1	JABWGI000000000	SAMN15234504	SEH1802	Escherichia coli
GCA_015698955.1	JABWGF000000000	SAMN15234501	SEH1601	Escherichia coli
GCA_015698975.1	JABWGE000000000	SAMN15234500	SEH1501	Escherichia coli
GCA_015698915.1	JABWGG000000000	SAMN15234502	SEH1701	Escherichia coli
GCA_015698925.1	JABWGH000000000	SAMN15234503	SEH1801	Escherichia coli

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Whole-Genome Characterization of Hemolytic Uremic Syndrome-associted Shiga Toxin producing Escherichia coli in Sweden

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