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Accession: PRJNA639273 ID: 639273

RNA-seq of human gastric cancer (human)

See Genome Information for Homo sapiens
We compared transcriptomic profiles of gastric carcinomas between patients carrying the ATG16L1 T300A SNP and patients without the SNP. More...
AccessionPRJNA639273; GEO: GSE152415
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsMa C et al., "Crohn's disease-associated ATG16L1 T300A genotype is associated with improved survival in gastric cancer.", EBioMedicine, 2021 May;67:103347
SubmissionRegistration date: 13-Jun-2020
Biomedical Informatics, University of Pittsburgh School of Medicine
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments47
Publications
PubMed1
PMC1
Other datasets
BioSample47
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes9
SRA Data Details
ParameterValue
Data volume, Gbases225
Data volume, Mbytes86527

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