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Accession: PRJNA639167 ID: 639167

ASCL1 ChIP-seq of patient-derived-xenograft (PDX) GBM lines and RNA-seq of mouse glioma tumors

This SuperSeries is composed of the SubSeries listed below. Overall design: Refer to individual Series
AccessionPRJNA639167; GEO: GSE152401
TypeUmbrella project
PublicationsVue TY et al., "ASCL1 regulates neurodevelopmental transcription factors and cell cycle genes in brain tumors of glioma mouse models.", Glia, 2020 Dec;68(12):2613-2630
SubmissionRegistration date: 12-Jun-2020
Neuroscience, UT Southwestern Medical Center
RelevanceSuperseries
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments14
Publications
PubMed1
PMC1
Other datasets
BioSample14
GEO DataSets3
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes164
SRA Data Details
ParameterValue
Data volume, Gbases26
Data volume, Mbytes18082
ASCL1 ChIP-seq of patient-derived-xenograft (PDX) GBM lines and RNA-seq of mouse glioma tumors encompasses the following 2 sub-projects:
Project TypeNumber of Projects
Epigenomics1
BioProject
accession
OrganismTitle
PRJNA639169Homo sapiensASCL1 ChIP-seq of patient-derived-xenograft (PDX) GBM lines (Neuroscience, UT Southwestern...)
Transcriptome or Gene expression1
BioProject
accession
OrganismTitle
PRJNA639168Mus musculusRNA-seq of mouse glioma tumors with or without ASCL1 (Neuroscience, UT Southwestern...)

Supplemental Content

Recent activity

  • ASCL1 ChIP-seq of patient-derived-xenograft (PDX) GBM lines and RNA-seq of mouse...
    ASCL1 ChIP-seq of patient-derived-xenograft (PDX) GBM lines and RNA-seq of mouse glioma tumors
    ASCL1 ChIP-seq of patient-derived-xenograft (PDX) GBM lines and RNA-seq of mouse glioma tumors
    BioProject
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