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Accession: PRJNA639125 ID: 639125

Gasterosteus aculeatus strain:Lake Benthic (three-spined stickleback)

Gasterosteus aculeatus strain:Lake Benthic Genome sequencing

See Genome Information for Gasterosteus aculeatus
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117 additional projects are related by organism.
The goal of this project is to improve the reference genome assembly of Threespine Sticklebacks. More...
AccessionPRJNA639125
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismGasterosteus aculeatus[Taxonomy ID: 69293]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Gasterosteus; Gasterosteus aculeatus
PublicationsNath S et al., "Improved contiguity of the threespine stickleback genome using long-read sequencing.", G3 (Bethesda), 2021 Feb 9;11(2)
Grants
  • "Expanding the toolkit for functional genetics in threespine stickleback to place genomics into its natural context" (Grant ID IOS 1645170, National Science Foundation)
  • "PREDOCTORAL TRAINING GRANT IN GENETICS" (Grant ID T32GM007103, National Institute of Health)
SubmissionRegistration date: 23-Feb-2021
University of Georgia
RelevanceModel Organism
Locus Tag PrefixHUT31
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)23
WGS master1
SRA Experiments1
Publications
PubMed1
PMC1
Other datasets
BioSample3
Assembly1
Assembly details:
SRA Data Details
ParameterValue
Data volume, Gbases16
Data volume, Mbytes7942
Related RefSeq Project
PRJNA707557 : Gasterosteus aculeatus strain:Lake Benthic RefSeq Genome sequencing

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