The microbiota associated to paddy soil and root was investigated using 454 pyrosequencing of 16S (Prokaryotes), ITS (Fungi) and 18S (AM fungi) amplicons under two different water managements, upland (non-flooded) and lowland (traditional flooding) and at three plant development stages (tillering, panicle formation and milky stage).
| Accession | PRJNA638897 |
| Data Type | Raw sequence reads |
| Scope | Multispecies |
| Publications | - Published online: Chialva M et al., "Water management and phenology influence the root-associated rice field microbiota", FEMS Microbiology Ecology, 2020;96(9)
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| Grants | - "RISINNOVA - INTEGRATED GENETIC AND GENOMIC APPROACHES FOR NEW ITALIAN RICE BREEDING STRATEGIES" (Grant ID 2010-2369, AGER Foundation)
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| Submission | Registration date: 11-Jun-2020
RISINNOVA- University of Torino
- Collaborator
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| Relevance | Agricultural |
Project Data:
| Resource Name | Number
of Links |
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| Sequence data |
| SRA Experiments | 90 |
| Other datasets |
| BioSample | 36 |