Metagenome mariculture Mediterranean Sea (MedMC) (ID 638822) - BioProject

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Accession: PRJNA638822 ID: 638822

Metagenome mariculture Mediterranean Sea (MedMC)

Metagenomes and MAGs from mariculture in Mediterranean Sea (MedMC)

Marine aquaculture (mariculture) is the fastest-growing food sector in the world to cover the increased demand for products for human consumption. More...

Accession	PRJNA638822
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	seawater metagenome[Taxonomy ID: 1561972] unclassified sequences; metagenomes; ecological metagenomes; seawater metagenome
Submission	Registration date: 29-Jul-2020 Evolutionary Genomics Group
Related Resources	Evolutionary Genomics Group Universidad Miguel Hernandez
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	48
SRA Experiments	3
Other datasets
BioSample	51
Assembly	48

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

48
48

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_013912125.1	JACERX000000000	SAMN15215219	MCMED-G01	Acidimicrobiales bacterium
GCA_013912105.1	JACERY000000000	SAMN15215220	MCMED-G02	Acidimicrobiales bacterium
GCA_013911395.1	JACETH000000000	SAMN15215255	MCMED-G37	Alcanivorax sp.
GCA_013911385.1	JACETG000000000	SAMN15215254	MCMED-G36	Alcanivorax sp.
GCA_013911655.1	JACESU000000000	SAMN15215242	MCMED-G24	Alphaproteobacteria bacterium
GCA_013911595.1	JACESY000000000	SAMN15215246	MCMED-G28	Azoarcus sp.
GCA_013911805.1	JACESK000000000	SAMN15215232	MCMED-G14	Blastomonas sp.
GCA_013912065.1	JACESA000000000	SAMN15215222	MCMED-G04	Brevundimonas sp.
GCA_013912025.1	JACESC000000000	SAMN15215224	MCMED-G06	Brevundimonas sp.
GCA_013912005.1	JACESB000000000	SAMN15215223	MCMED-G05	Brevundimonas sp.
GCA_013911555.1	JACESZ000000000	SAMN15215247	MCMED-G29	Burkholderiales bacterium
GCA_013912085.1	JACERZ000000000	SAMN15215221	MCMED-G03	Candidatus Actinomarinales bacterium
GCA_013911485.1	JACETD000000000	SAMN15215251	MCMED-G33	Candidatus Dadabacteria bacterium
GCA_013911465.1	JACETE000000000	SAMN15215252	MCMED-G34	Candidatus Poseidoniales archaeon
GCA_013911445.1	JACETF000000000	SAMN15215253	MCMED-G35	Candidatus Poseidoniales archaeon
GCA_013911295.1	JACETN000000000	SAMN15215261	MCMED-G43	Candidatus Thioglobus sp.
GCA_013911545.1	JACETA000000000	SAMN15215248	MCMED-G30	Chloroflexi bacterium
GCA_013911345.1	JACETJ000000000	SAMN15215257	MCMED-G39	Congregibacter sp.
GCA_013911625.1	JACESW000000000	SAMN15215244	MCMED-G26	Cryomorphaceae bacterium
GCA_013911865.1	JACESL000000000	SAMN15215233	MCMED-G15	Erythrobacter sp.
GCA_013911995.1	JACESD000000000	SAMN15215225	MCMED-G07	Euryhalocaulis sp.
GCA_013911585.1	JACESX000000000	SAMN15215245	MCMED-G27	Flavobacteriaceae bacterium
GCA_013911945.1	JACESJ000000000	SAMN15215231	MCMED-G13	Hyphomicrobiales bacterium
GCA_013911975.1	JACESF000000000	SAMN15215227	MCMED-G09	Hyphomicrobiales bacterium
GCA_013911915.1	JACESH000000000	SAMN15215229	MCMED-G11	Hyphomicrobiales bacterium
GCA_013911905.1	JACESG000000000	SAMN15215228	MCMED-G10	Hyphomicrobiales bacterium
GCA_013911885.1	JACESI000000000	SAMN15215230	MCMED-G12	Hyphomicrobiales bacterium
GCA_013911415.1	JACETI000000000	SAMN15215256	MCMED-G38	Legionella sp.
GCA_013911645.1	JACESV000000000	SAMN15215243	MCMED-G25	Muricauda sp.
GCA_013911965.1	JACESE000000000	SAMN15215226	MCMED-G08	Phenylobacterium sp.
GCA_013911165.1	JACETR000000000	SAMN15215265	MCMED-G47	Planctomycetes bacterium
GCA_013911835.1	JACESM000000000	SAMN15215234	MCMED-G16	Porphyrobacter sp.
GCA_013911225.1	JACETO000000000	SAMN15215262	MCMED-G44	Pseudomonas sp.
GCA_013911255.1	JACETQ000000000	SAMN15215264	MCMED-G46	Pseudomonas sp.
GCA_013911245.1	JACETP000000000	SAMN15215263	MCMED-G45	Pseudomonas sp.
GCA_013911335.1	JACETL000000000	SAMN15215259	MCMED-G41	SAR86 cluster bacterium
GCA_013911325.1	JACETK000000000	SAMN15215258	MCMED-G40	SAR86 cluster bacterium
GCA_013911285.1	JACETM000000000	SAMN15215260	MCMED-G42	SAR86 cluster bacterium
GCA_013911795.1	JACESN000000000	SAMN15215235	MCMED-G17	Sphingobium sp.
GCA_013911745.1	JACESO000000000	SAMN15215236	MCMED-G18	Sphingobium sp.
GCA_013911685.1	JACESR000000000	SAMN15215239	MCMED-G21	Sphingomonas sp.
GCA_013911785.1	JACESQ000000000	SAMN15215238	MCMED-G20	Sphingomonas sp.
GCA_013911665.1	JACESS000000000	SAMN15215240	MCMED-G22	Sphingopyxis sp.
GCA_013911715.1	JACEST000000000	SAMN15215241	MCMED-G23	Sphingopyxis sp.
GCA_013911755.1	JACESP000000000	SAMN15215237	MCMED-G19	Sphingosinicella sp.
GCA_013911515.1	JACETC000000000	SAMN15215250	MCMED-G32	Synechococcus sp.
GCA_013911495.1	JACETB000000000	SAMN15215249	MCMED-G31	Synechococcus sp.
GCA_013911195.1	JACETS000000000	SAMN15215266	MCMED-G48	Verrucomicrobiales bacterium

SRA Data Details

Parameter	Value
Data volume, Gbases	125
Data volume, Mbytes	50507

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Link to WGS master record(s)

Related Resources

Evolutionary Genomics Group
Evolutionary Genomics Group
Universidad Miguel Hernandez
Universidad Miguel Hernandez

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