Barley (cultivar Morex) genome assembly based on TRITEX, an open-source computational workflow that combines paired-end, mate-pair, 10X Genomics linked-read with chromosome conformation capture sequencing data to construct sequence scaffolds with megabase-scale contiguity ordered into chromosomal 7 pseudomolecules.
The assembly contains seven pseudomolecules. Unplaced scaffolds are available as WGS contigs.
| Accession | PRJEB38749 |
| Data Type | Genome sequencing and assembly |
| Scope | Monoisolate |
| Publications | Monat C et al., "TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools.", Genome Biol, 2019 Dec 18;20(1):284 |
| Submission | Registration date: 9-Jun-2020
Leibniz Institute of Plant Genetics and Crop Plant Research |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 8 |
| WGS master | 1 |
| Genomic DNA | 7 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 1 |