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Accession: PRJNA637090 ID: 637090

A comprehensive RNA handling and transcriptomics guide for high-throughput processing of Plasmodium blood-stage samples. (malaria parasite P. falciparum)

See Genome Information for Plasmodium falciparum
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581 additional projects are related by organism.
Here we have designed a full processing pipeline of P. falciparum RNA that innclues RNA preservation, extraction, cDNA synthesis and amplification, globin depletion and final transcriptome readout. More...
AccessionPRJNA637090; GEO: GSE151754
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismPlasmodium falciparum[Taxonomy ID: 5833]
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum
PublicationsKucharski M et al., "A comprehensive RNA handling and transcriptomics guide for high-throughput processing of Plasmodium blood-stage samples.", Malar J, 2020 Oct 9;19(1):363
SubmissionRegistration date: 3-Jun-2020
Molecular Genetics&Cell Biology, Nanyang Technological University
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Publications
PubMed1
PMC1
Other datasets
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Spots308140
Data volume, Processed Mbytes8
Data volume, Supplementary Mbytes35

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