ID 636771 - BioProject

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Accession: PRJNA636771 ID: 636771

Detection of diverse carbapenem and multidrug resistance genes and high-risk strain types among carbapenem non-susceptible clinical isolates of target gram-negative bacteria in Kenya

Accession	PRJNA636771
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Musila L et al., "Detection of diverse carbapenem and multidrug resistance genes and high-risk strain types among carbapenem non-susceptible clinical isolates of target gram-negative bacteria in Kenya.", PLoS One, 2021;16(2):e0246937
Grants	"Surveillance of antimicrobial resistance in in and out-patient populations in Kenya" (Grant ID PROMIS ID 20160270153 FY17, Armed Forces Health Surveillance Branch)
Submission	Registration date: 2-Jun-2020 USAMRD-A
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	47
Publications
PubMed	1
PMC	1
Other datasets
BioSample	47
Assembly	47

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

47
47

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_017169465.1	JABTXC000000000	SAMN15083379	KAB6	Acinetobacter baumannii
GCA_017169455.1	JABTXD000000000	SAMN15083378	KAB5	Acinetobacter baumannii
GCA_017169435.1	JABTXE000000000	SAMN15083377	KAB4	Acinetobacter baumannii
GCA_017169415.1	JABTXB000000000	SAMN15083380	KAB7	Acinetobacter baumannii
GCA_017169375.1	JABTWZ000000000	SAMN15083381	KAB16	Acinetobacter baumannii
GCA_017169355.1	JABTWX000000000	SAMN15083383	KAB18	Acinetobacter baumannii
GCA_017169335.1	JABTWY000000000	SAMN15083382	KAB17	Acinetobacter baumannii
GCA_017169275.1	JABTWV000000000	SAMN15083384	KAB1	Acinetobacter baumannii
GCA_017169175.1	JABTWT000000000	SAMN15083385	KAB2	Acinetobacter baumannii
GCA_017169155.1	JABTWP000000000	SAMN15083387	KAB10	Acinetobacter baumannii
GCA_017169125.1	JABTWM000000000	SAMN15083390	KAB15	Acinetobacter baumannii
GCA_017169105.1	JABTWN000000000	SAMN15083389	KAB12	Acinetobacter baumannii
GCA_017169085.1	JABTWO000000000	SAMN15083388	KAB11	Acinetobacter baumannii
GCA_017169215.1	JABTWS000000000	SAMN15083386	KAB3	Acinetobacter baumannii
GCA_017169025.1	JABTWK000000000	SAMN15083391	KAB19	Acinetobacter baumannii
GCA_017168975.1	JABTWI000000000	SAMN15083393	KAB21	Acinetobacter baumannii
GCA_017168955.1	JABTWH000000000	SAMN15083394	KAB22	Acinetobacter baumannii
GCA_017168935.1	JABTWG000000000	SAMN15083395	KAB23	Acinetobacter baumannii
GCA_017168885.1	JABTWE000000000	SAMN15083397	KAB13	Acinetobacter baumannii
GCA_017168905.1	JABTWD000000000	SAMN15083398	KAB14	Acinetobacter baumannii
GCA_017168795.1	JABTWC000000000	SAMN15083399	KAB9	Acinetobacter baumannii
GCA_017168655.1	JABTVV000000000	SAMN15083401	KAB26	Acinetobacter baumannii
GCA_017168645.1	JABTVU000000000	SAMN15083402	KAB27	Acinetobacter baumannii
GCA_017168635.1	JABTVW000000000	SAMN15083400	KAB25	Acinetobacter baumannii
GCA_017168855.1	JABTWF000000000	SAMN15083396	KAB24	Acinetobacter baumannii
GCA_017168535.1	JABTVS000000000	SAMN15083403	KAB8	Acinetobacter baumannii
GCA_017169075.1	JABUOF000000000	SAMN15083405	KEB2	Enterobacter asburiae
GCA_017169255.1	JABUOG000000000	SAMN15083404	KEB1	Enterobacter hormaechei
GCA_017169015.1	JABUOE000000000	SAMN15083392	KAB20	Escherichia coli
GCA_017168985.1	JABTWJ000000000	SAMN15083406	KEC1	Escherichia coli
GCA_017168615.1	JABTVQ000000000	SAMN15083408	KEC3	Escherichia coli
GCA_017168755.1	JABTVY000000000	SAMN15083407	KEC2	Escherichia coli
GCA_017168575.1	JABTVP000000000	SAMN15083409	KKP2	Klebsiella pneumoniae
GCA_017168835.1	JAFDTA000000000	SAMN15083416	KPA7	Pseudomonas aeruginosa
GCA_017168815.1	JABTWA000000000	SAMN15083419	KPA9	Pseudomonas aeruginosa
GCA_017168565.1	JABTVR000000000	SAMN15083423	KPA13	Pseudomonas aeruginosa
GCA_017168745.1	JABTWB000000000	SAMN15083418	KPA14	Pseudomonas aeruginosa
GCA_017168735.1	JABTVZ000000000	SAMN15083420	KPA10	Pseudomonas aeruginosa
GCA_017168665.1	JABTVT000000000	SAMN15083422	KPA12	Pseudomonas aeruginosa
GCA_017168675.1	JABTVX000000000	SAMN15083421	KPA11	Pseudomonas aeruginosa
GCA_017169225.1	JABTWQ000000000	SAMN15083414	KPA4	Pseudomonas aeruginosa
GCA_017169055.1	JABTWL000000000	SAMN15083415	KPA5	Pseudomonas aeruginosa
GCA_017169185.1	JABTWR000000000	SAMN15083413	KPA3	Pseudomonas aeruginosa
GCA_017168875.1	JAFDSZ000000000	SAMN15083417	KPA8	Pseudomonas aeruginosa
GCA_017169305.1	JABTWW000000000	SAMN15083411	KPA2	Pseudomonas aeruginosa
GCA_017169295.1	JABTWU000000000	SAMN15083412	KPA1	Pseudomonas aeruginosa
GCA_017169395.1	JABTXA000000000	SAMN15083410	KPA6	Pseudomonas aeruginosa

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Detection of diverse carbapenem and multidrug resistance genes and high-risk strain types among carbapenem non-susceptible clinical isolates of target gram-negative bacteria in Kenya

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