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Accession: PRJNA636386 ID: 636386

Convergent transcriptional responses to acquisition and amelioration of different conjugative plasmids

See Genome Information for Pseudomonas fluorescens
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Aim: to identify the transcriptional responses to acquisition of conjugative megaplasmids by Pseudomonas fluorescens, and how these effects are impacted by known compensatory mutations. More...
AccessionPRJNA636386; GEO: GSE151570
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismPseudomonas fluorescens SBW25[Taxonomy ID: 216595]
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas fluorescens; Pseudomonas fluorescens SBW25
PublicationsHall JPJ et al., "Plasmid fitness costs are caused by specific genetic conflicts enabling resolution by compensatory mutation.", PLoS Biol, 2021 Oct;19(10):e3001225
SubmissionRegistration date: 1-Jun-2020
University of Liverpool
RelevanceUnknown
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments30
Publications
PubMed1
PMC1
Other datasets
BioSample30
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes5
SRA Data Details
ParameterValue
Data volume, Gbases195
Data volume, Mbytes74547

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