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Accession: PRJNA636361 ID: 636361

A comprehensive RNA handling and transcriptomics guide for high-throughput processing of Plasmodium blood stage samples (malaria parasite P. falciparum)

See Genome Information for Plasmodium falciparum
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581 additional projects are related by organism.
Here we have designed a full processing pipeline of P. falciparum RNA that innclues RNA preservation, extraction, cDNA synthesis and amplification, globin depletion and final transcriptome readout. More...
AccessionPRJNA636361; GEO: GSE151557
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismPlasmodium falciparum[Taxonomy ID: 5833]
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum
PublicationsKucharski M et al., "A comprehensive RNA handling and transcriptomics guide for high-throughput processing of Plasmodium blood-stage samples.", Malar J, 2020 Oct 9;19(1):363
SubmissionRegistration date: 1-Jun-2020
ZB Lab, School of Biological Sciences, Nanyang Technological University
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments22
Publications
PubMed1
PMC1
Other datasets
BioSample22
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes4
SRA Data Details
ParameterValue
Data volume, Gbases120
Data volume, Mbytes48587

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