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Accession: PRJDB9647 ID: 636136

aquatic metagenome

Environmental DNA detection of pseudocrangonyctid amphipods inhabiting Japanese groundwater

An environmental DNA detection method is utilized for revealing the truly cryptic species diversity of the subterranean amphipod genus Pseudocrangonyx in the Japanese Archipelago. More...
AccessionPRJDB9647
Data TypeTargeted Locus (Loci)
ScopeMultiisolate
Organismaquatic metagenome[Taxonomy ID: 1169740]
unclassified sequences; metagenomes; ecological metagenomes; aquatic metagenome
Publications
  • Published online: Yonezawa S et al., "Environmental DNA reveals cryptic diversity within the subterranean amphipod genus Pseudocrangonyx Akatsuka & Komai, 1922 (Amphipoda: Crangonyctoidea: Pseudocrangonyctidae) from central Japan", Journal of Crustacean Biology, 2020;
Grants
  • JP18K14780, Japan Society for the Promotion of Science
SubmissionRegistration date: 30-May-2020
Laboratory of Systematic Zoology, Department of Zoology, Kyoto University, Graduate School of Science
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments57
Other datasets
BioSample57
SRA Data Details
ParameterValue
Data volume, Mbases120
Data volume, Mbytes35

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