This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA636087; GEO: GSE151503 |
| Type | Umbrella project |
| Publications | Choi Y et al., "Liver-Specific Deletion of Mouse CTCF Leads to Hepatic Steatosis via Augmented PPARĪ³ Signaling.", Cell Mol Gastroenterol Hepatol, 2021;12(5):1761-1787 |
| Submission | Registration date: 30-May-2020
Department of Environmental Medical Biology, Yonsei University College of Medicine |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 40 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 40 |
| GEO DataSets | 4 |
RNA-Seq, ChIP-Seq and HiC of Wild Type and CTCF cKO Liver encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
| Epigenomics | 2 |
BioProject
accession | Organism | Title |
|---|
| PRJNA636091 | Mus musculus | Genome-wide maps of chromatin state in liver. (Department of Environmental...) | | PRJNA742553 | Mus musculus | in situ Hi-C in WT and CTCF depleted mouse livers (Department of Environmental...) |
|
| Transcriptome or Gene expression | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJNA636090 | Mus musculus | Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and CTCF cKO Transcriptomes (Department of Environmental...) |
|