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Accession: PRJNA635675 ID: 635675

Transcriptome comparison of wild-type and tnnt2a MO zebrafish hearts (zebrafish)

See Genome Information for Danio rerio
We performed RNA-seq analyses to characterize transcriptomic changes in non-beating tnnt2a morphant compared to wild-type hearts. Overall design: Cardiac mRNA profile of wild-type and tnnt2a morphant zebrafish hearts at 54 hpf.
AccessionPRJNA635675; GEO: GSE151398
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismDanio rerio[Taxonomy ID: 7955]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio; Danio rerio
PublicationsFontana F et al., "Antagonistic Activities of Vegfr3/Flt4 and Notch1b Fine-tune Mechanosensitive Signaling during Zebrafish Cardiac Valvulogenesis.", Cell Rep, 2020 Jul 14;32(2):107883
SubmissionRegistration date: 28-May-2020
University of Potsdam
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments6
Publications
PubMed1
Other datasets
BioSample6
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes2
SRA Data Details
ParameterValue
Data volume, Gbases33
Data volume, Mbytes13098

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