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Accession: PRJEB38036 ID: 635068

Assessment of fecal DNA extraction protocols for metagenomic study

Aiming at providing an alternative method for human fecal DNA extraction, this study compared 5 DNA extraction protocols (MagPure Stool DNA KF Kit (MP), Macherey-Nagel Nucleospin Soil kit (MN), Zymo Research Quick-DNATM Fecal/Soil Microbe kit (ZYMO), MOBIO DNeasy PowerSoil protocol (PS) and MetaHIT) with a standardized protocol Q using 1 microbial mock community (MMC) (contained 8 bacterial and 2 fungal strains) and fecal samples from 6 individuals via shotgun metagenomics sequencing. More...
AccessionPRJEB38036
ScopeMonoisolate
SubmissionRegistration date: 26-May-2020
CNGB
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments234
Other datasets
BioSample233
SRA Data Details
ParameterValue
Data volume, Gbases1,764
Data volume, Tbytes1.92

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