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Accession: PRJNA634902 ID: 634902

Transcriptional profiling of ileal lamina propria lymphocytes of wild type and Lyz1KO mice by single-cell RNA-seq (house mouse)

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Paneth cells express Lyz1, a gene encoding for lysozyme. To investigate the transcriptomic profiles of wild type and Lyz1-knockout mouse ileal lamina propria cells, we performed single-cell RNA-seq. More...
AccessionPRJNA634902; GEO: GSE151152
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsYu S et al., "Paneth Cell-Derived Lysozyme Defines the Composition of Mucolytic Microbiota and the Inflammatory Tone of the Intestine.", Immunity, 2020 Aug 18;53(2):398-416.e8
SubmissionRegistration date: 25-May-2020
Gao, Biological Sciences, Rutgers, the State University of New Jersey
RelevanceModel Organism
Project Data:
Resource NameNumber
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Sequence data
SRA Experiments2
Publications
PubMed1
PMC1
Other datasets
BioSample2
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes55
SRA Data Details
ParameterValue
Data volume, Gbases129
Data volume, Mbytes40964

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