Bacteria (ID 634452) - BioProject

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Accession: PRJNA634452 ID: 634452

Bacteria

Bacteria Genome sequencing and assembly

See Genome Information for Staphylococcus aureus

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Staphylococcaceae from food, livestock farms and wild animals

Accession	PRJNA634452
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Lienen T et al., "Phylogenetic Tracking of LA-MRSA ST398 Intra-Farm Transmission among Animals, Humans and the Environment on German Dairy Farms.", Microorganisms, 2021 May 21;9(6) Lienen T et al., "Genomic Distinctions of LA-MRSA ST398 on Dairy Farms From Different German Federal States With a Low Risk of Severe Human Infections.", Front Microbiol, 2020;11:575321
Grants	"#1HealthPREVENT" (Grant ID 01KI1727C, German Federal Ministry of Education and Research)
Submission	Registration date: 15-Jun-2020 German Federal Institute for Risk Assessment
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	158
Publications
PubMed	2
PMC	2
Other datasets
BioSample	222
Assembly	158

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

158
158

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_017918115.1	JAGDQY000000000	SAMN18255002	F11	Staphylococcus aureus
GCA_017920155.1	JAGDUG000000000	SAMN18254916	A4	Staphylococcus aureus
GCA_017920165.1	JAGDUI000000000	SAMN18254914	A2	Staphylococcus aureus
GCA_017920135.1	JAGDUH000000000	SAMN18254915	A3	Staphylococcus aureus
GCA_017920115.1	JAGDUF000000000	SAMN18254917	A5	Staphylococcus aureus
GCA_017920095.1	JAGDUE000000000	SAMN18254918	A6	Staphylococcus aureus
GCA_017920065.1	JAGDUD000000000	SAMN18254919	A7	Staphylococcus aureus
GCA_017920055.1	JAGDUC000000000	SAMN18254920	A8	Staphylococcus aureus
GCA_017920035.1	JAGDUB000000000	SAMN18254921	A9	Staphylococcus aureus
GCA_017920015.1	JAGDTZ000000000	SAMN18254923	B2	Staphylococcus aureus
GCA_017919995.1	JAGDUA000000000	SAMN18254922	B1	Staphylococcus aureus
GCA_017919975.1	JAGDTX000000000	SAMN18254925	B6	Staphylococcus aureus
GCA_017919955.1	JAGDTV000000000	SAMN18254927	B8	Staphylococcus aureus
GCA_017919935.1	JAGDTY000000000	SAMN18254924	B4	Staphylococcus aureus
GCA_017919915.1	JAGDTW000000000	SAMN18254926	B7	Staphylococcus aureus
GCA_017919895.1	JAGDTU000000000	SAMN18254928	B9	Staphylococcus aureus
GCA_017919845.1	JAGDTS000000000	SAMN18254930	B11	Staphylococcus aureus
GCA_017919855.1	JAGDTT000000000	SAMN18254929	B10	Staphylococcus aureus
GCA_017919835.1	JAGDTQ000000000	SAMN18254932	B13	Staphylococcus aureus
GCA_017919805.1	JAGDTP000000000	SAMN18254933	B14	Staphylococcus aureus
GCA_017919795.1	JAGDTR000000000	SAMN18254931	B12	Staphylococcus aureus
GCA_017919775.1	JAGDTO000000000	SAMN18254934	B15	Staphylococcus aureus
GCA_017919745.1	JAGDTN000000000	SAMN18254935	B16	Staphylococcus aureus
GCA_017919715.1	JAGDTL000000000	SAMN18254937	C1	Staphylococcus aureus
GCA_017919705.1	JAGDTK000000000	SAMN18254938	C2	Staphylococcus aureus
GCA_017919695.1	JAGDTM000000000	SAMN18254936	B17	Staphylococcus aureus
GCA_017919675.1	JAGDTJ000000000	SAMN18254939	C3	Staphylococcus aureus
GCA_017919655.1	JAGDTH000000000	SAMN18254941	C5	Staphylococcus aureus
GCA_017919615.1	JAGDTI000000000	SAMN18254940	C4	Staphylococcus aureus
GCA_017919625.1	JAGDTG000000000	SAMN18254942	C6	Staphylococcus aureus
GCA_017919595.1	JAGDTF000000000	SAMN18254943	C8	Staphylococcus aureus
GCA_017919565.1	JAGDTD000000000	SAMN18254945	C11	Staphylococcus aureus
GCA_017919555.1	JAGDTE000000000	SAMN18254944	C9	Staphylococcus aureus
GCA_017919525.1	JAGDTC000000000	SAMN18254946	C12	Staphylococcus aureus
GCA_017919515.1	JAGDTA000000000	SAMN18254948	C14	Staphylococcus aureus
GCA_017919495.1	JAGDTB000000000	SAMN18254947	C13	Staphylococcus aureus
GCA_017919475.1	JAGDSX000000000	SAMN18254951	C17	Staphylococcus aureus
GCA_017919455.1	JAGDSZ000000000	SAMN18254949	C15	Staphylococcus aureus
GCA_017919425.1	JAGDSY000000000	SAMN18254950	C16	Staphylococcus aureus
GCA_017919415.1	JAGDSW000000000	SAMN18254952	C18	Staphylococcus aureus
GCA_017919395.1	JAGDSV000000000	SAMN18254953	C19	Staphylococcus aureus
GCA_017919375.1	JAGDSU000000000	SAMN18254954	C20	Staphylococcus aureus
GCA_017919345.1	JAGDST000000000	SAMN18254955	C21	Staphylococcus aureus
GCA_017919335.1	JAGDSS000000000	SAMN18254956	C22	Staphylococcus aureus
GCA_017919315.1	JAGDSP000000000	SAMN18254959	D7	Staphylococcus aureus
GCA_017919295.1	JAGDSR000000000	SAMN18254957	C23	Staphylococcus aureus
GCA_017919275.1	JAGDSQ000000000	SAMN18254958	D3	Staphylococcus aureus
GCA_017919245.1	JAGDSN000000000	SAMN18254961	D9	Staphylococcus aureus
GCA_017919235.1	JAGDSO000000000	SAMN18254960	D8	Staphylococcus aureus
GCA_017919215.1	JAGDSM000000000	SAMN18254962	D10	Staphylococcus aureus
GCA_017919185.1	JAGDSL000000000	SAMN18254963	D11	Staphylococcus aureus
GCA_017919175.1	JAGDSK000000000	SAMN18254964	D12	Staphylococcus aureus
GCA_017919145.1	JAGDSJ000000000	SAMN18254965	D13	Staphylococcus aureus
GCA_017919135.1	JAGDSI000000000	SAMN18254966	D14	Staphylococcus aureus
GCA_017919115.1	JAGDSG000000000	SAMN18254968	D16	Staphylococcus aureus
GCA_017919095.1	JAGDSH000000000	SAMN18254967	D15	Staphylococcus aureus
GCA_017919075.1	JAGDSF000000000	SAMN18254969	D17	Staphylococcus aureus
GCA_017919055.1	JAGDSE000000000	SAMN18254970	D18	Staphylococcus aureus
GCA_017919035.1	JAGDSD000000000	SAMN18254971	D19	Staphylococcus aureus
GCA_017919015.1	JAGDSC000000000	SAMN18254972	E1	Staphylococcus aureus
GCA_017918995.1	JAGDRZ000000000	SAMN18254975	E5	Staphylococcus aureus
GCA_017918975.1	JAGDSB000000000	SAMN18254973	E3	Staphylococcus aureus
GCA_017918955.1	JAGDSA000000000	SAMN18254974	E4	Staphylococcus aureus
GCA_017918925.1	JAGDRY000000000	SAMN18254976	E6	Staphylococcus aureus
GCA_017918915.1	JAGDRX000000000	SAMN18254977	E7	Staphylococcus aureus
GCA_017918895.1	JAGDRV000000000	SAMN18254979	E9	Staphylococcus aureus
GCA_017918855.1	JAGDRW000000000	SAMN18254978	E8	Staphylococcus aureus
GCA_017918865.1	JAGDRU000000000	SAMN18254980	E10	Staphylococcus aureus
GCA_017918835.1	JAGDRT000000000	SAMN18254981	E11	Staphylococcus aureus
GCA_017918815.1	JAGDRS000000000	SAMN18254982	E12	Staphylococcus aureus
GCA_017918785.1	JAGDRP000000000	SAMN18254985	E15	Staphylococcus aureus
GCA_017918775.1	JAGDRR000000000	SAMN18254983	E13	Staphylococcus aureus
GCA_017918755.1	JAGDRQ000000000	SAMN18254984	E14	Staphylococcus aureus
GCA_017918725.1	JAGDRL000000000	SAMN18254989	E19	Staphylococcus aureus
GCA_017918715.1	JAGDRM000000000	SAMN18254988	E18	Staphylococcus aureus
GCA_017918695.1	JAGDRO000000000	SAMN18254986	E16	Staphylococcus aureus
GCA_017918665.1	JAGDRN000000000	SAMN18254987	E17	Staphylococcus aureus
GCA_017918655.1	JAGDRK000000000	SAMN18254990	E20	Staphylococcus aureus
GCA_017918635.1	JAGDRJ000000000	SAMN18254991	E21	Staphylococcus aureus
GCA_017918585.1	JAGDRI000000000	SAMN18254992	E22	Staphylococcus aureus
GCA_017918575.1	JAGDRF000000000	SAMN18254995	E25	Staphylococcus aureus
GCA_017918565.1	JAGDRG000000000	SAMN18254994	E24	Staphylococcus aureus
GCA_017918555.1	JAGDRH000000000	SAMN18254993	E23	Staphylococcus aureus
GCA_017918535.1	JAGDRE000000000	SAMN18254996	F1	Staphylococcus aureus
GCA_017918515.1	JAGDRD000000000	SAMN18254997	F4	Staphylococcus aureus
GCA_017918495.1	JAGDRB000000000	SAMN18254999	F6	Staphylococcus aureus
GCA_017918475.1	JAGDRA000000000	SAMN18255000	F7	Staphylococcus aureus
GCA_017918455.1	JAGDRC000000000	SAMN18254998	F5	Staphylococcus aureus
GCA_017918435.1	JAGDQZ000000000	SAMN18255001	F8	Staphylococcus aureus
GCA_017918415.1	JAGDQU000000000	SAMN18255006	F18	Staphylococcus aureus
GCA_017918395.1	JAGDQW000000000	SAMN18255004	F13	Staphylococcus aureus
GCA_017918365.1	JAGDQV000000000	SAMN18255005	F14	Staphylococcus aureus
GCA_017918355.1	JAGDQX000000000	SAMN18255003	F12	Staphylococcus aureus
GCA_017918335.1	JAGDQT000000000	SAMN18255007	F19	Staphylococcus aureus
GCA_017918285.1	JAGDQS000000000	SAMN18255008	F20	Staphylococcus aureus
GCA_013344945.1	JABVAJ000000000	SAMN15166405	Nigeria-382	Staphylococcus aureus
GCA_013344745.1	JABVAO000000000	SAMN15166410	Nigeria-481	Staphylococcus aureus
GCA_013344785.1	JABVAG000000000	SAMN15166402	Nigeria-257	Staphylococcus aureus
GCA_013345645.1	JABUZM000000000	SAMN15166382	Nigeria-119	Staphylococcus aureus
GCA_013345575.1	JABUZL000000000	SAMN15166381	Nigeria-118	Staphylococcus aureus
GCA_013345585.1	JABUZN000000000	SAMN15166383	Nigeria-128	Staphylococcus aureus
GCA_013345595.1	JABUZP000000000	SAMN15166385	Nigeria-132	Staphylococcus aureus
GCA_013345565.1	JABVAD000000000	SAMN15166399	Nigeria-250	Staphylococcus aureus
GCA_013345545.1	JABUZT000000000	SAMN15166389	Nigeria-141	Staphylococcus aureus
GCA_013345465.1	JABUZQ000000000	SAMN15166386	Nigeria-134	Staphylococcus aureus
GCA_013345475.1	JABUZO000000000	SAMN15166384	Nigeria-130	Staphylococcus aureus
GCA_013345485.1	JABUZR000000000	SAMN15166387	Nigeria-138	Staphylococcus aureus
GCA_013345495.1	JABUZS000000000	SAMN15166388	Nigeria-139	Staphylococcus aureus
GCA_013345445.1	JABUZW000000000	SAMN15166392	Nigeria-146	Staphylococcus aureus
GCA_013345375.1	JABVAB000000000	SAMN15166397	Nigeria-202	Staphylococcus aureus
GCA_013345385.1	JABUZU000000000	SAMN15166390	Nigeria-142	Staphylococcus aureus
GCA_013345395.1	JABUZX000000000	SAMN15166393	Nigeria-153	Staphylococcus aureus
GCA_013345365.1	JABUZY000000000	SAMN15166394	Nigeria-156	Staphylococcus aureus
GCA_013345295.1	JABVAC000000000	SAMN15166398	Nigeria-244	Staphylococcus aureus
GCA_013345275.1	JABUZV000000000	SAMN15166391	Nigeria-145	Staphylococcus aureus
GCA_013345265.1	JABVAN000000000	SAMN15166409	Nigeria-434	Staphylococcus aureus
GCA_013345305.1	JABUZZ000000000	SAMN15166395	Nigeria-157	Staphylococcus aureus
GCA_013345285.1	JABVAA000000000	SAMN15166396	Nigeria-190	Staphylococcus aureus
GCA_013346825.1	JABVAF000000000	SAMN15166401	Nigeria-254	Staphylococcus aureus
GCA_013346785.1	JABVAE000000000	SAMN15166400	Nigeria-253	Staphylococcus aureus
GCA_013346775.1	JABVAM000000000	SAMN15166408	Nigeria-432	Staphylococcus aureus
GCA_013346765.1	JABVAL000000000	SAMN15166407	Nigeria-399	Staphylococcus aureus
GCA_013346735.1	JABVAH000000000	SAMN15166403	Nigeria-376	Staphylococcus aureus
GCA_013346725.1	JABVAK000000000	SAMN15166406	Nigeria-385	Staphylococcus aureus
GCA_013346705.1	JABVAI000000000	SAMN15166404	Nigeria-381	Staphylococcus aureus
GCA_013624505.1	JABMJM000000000	SAMN15014531	GA1	Staphylococcus aureus
GCA_013624495.1	JABMJL000000000	SAMN15014532	HA1	Staphylococcus aureus
GCA_013625075.1	JABMKK000000000	SAMN15014507	AA8	Staphylococcus aureus
GCA_013624755.1	JABMJW000000000	SAMN15014521	EC2	Staphylococcus aureus
GCA_013624725.1	JABMJV000000000	SAMN15014522	ED1	Staphylococcus aureus
GCA_013624855.1	JABMKB000000000	SAMN15014516	DB1	Staphylococcus aureus
GCA_013624825.1	JABMKA000000000	SAMN15014517	EA1	Staphylococcus aureus
GCA_013624805.1	JABMJZ000000000	SAMN15014518	EB1	Staphylococcus aureus
GCA_013624795.1	JABMJX000000000	SAMN15014520	EC1	Staphylococcus aureus
GCA_013624785.1	JABMJY000000000	SAMN15014519	EB2	Staphylococcus aureus
GCA_013624675.1	JABMJU000000000	SAMN15014523	ED2	Staphylococcus aureus
GCA_013624645.1	JABMJS000000000	SAMN15014525	EE2	Staphylococcus aureus
GCA_013624705.1	JABMJR000000000	SAMN15014526	EE3	Staphylococcus aureus
GCA_013624685.1	JABMJT000000000	SAMN15014524	EE1	Staphylococcus aureus
GCA_013624625.1	JABMJQ000000000	SAMN15014527	EE4	Staphylococcus aureus
GCA_013624595.1	JABMJP000000000	SAMN15014528	EE5	Staphylococcus aureus
GCA_013624565.1	JABMJN000000000	SAMN15014530	FB1	Staphylococcus aureus
GCA_013624555.1	JABMJO000000000	SAMN15014529	FA1	Staphylococcus aureus
GCA_013625235.1	JABMKR000000000	SAMN15014500	AA1	Staphylococcus aureus
GCA_013625205.1	JABMKQ000000000	SAMN15014501	AA2	Staphylococcus aureus
GCA_013625165.1	JABMKP000000000	SAMN15014502	AA3	Staphylococcus aureus
GCA_013625145.1	JABMKN000000000	SAMN15014504	AA5	Staphylococcus aureus
GCA_013625125.1	JABMKO000000000	SAMN15014503	AA4	Staphylococcus aureus
GCA_013625135.1	JABMKM000000000	SAMN15014505	AA6	Staphylococcus aureus
GCA_013625015.1	JABMKI000000000	SAMN15014509	BA1	Staphylococcus aureus
GCA_013625045.1	JABMKL000000000	SAMN15014506	AA7	Staphylococcus aureus
GCA_013625035.1	JABMKJ000000000	SAMN15014508	AA9	Staphylococcus aureus
GCA_013625025.1	JABMKH000000000	SAMN15014510	BB1	Staphylococcus aureus
GCA_013624945.1	JABMKF000000000	SAMN15014512	BC2	Staphylococcus aureus
GCA_013624935.1	JABMKG000000000	SAMN15014511	BC1	Staphylococcus aureus
GCA_013624915.1	JABMKE000000000	SAMN15014513	CA1	Staphylococcus aureus
GCA_013624905.1	JABMKD000000000	SAMN15014514	CB1	Staphylococcus aureus
GCA_013624895.1	JABMKC000000000	SAMN15014515	DA1	Staphylococcus aureus

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