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Accession: PRJNA634392 ID: 634392

Comparative transcriptomic analysis of WT, FOXK1/2 KO, DKO cells and FOXK1 KO cells with reconstitution of several FOXK1 mutants (human)

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The goal of this study was to apply Next Generation Sequencing analyses to identify genes and pathways regulated by the FOXK1 and FOXK2 transcription factor in HeLa cells and to see whether reconstitution of FOXK1 WT and mutants can rescue the altered gene regulation in FOXK1 KO cells. More...
AccessionPRJNA634392; GEO: GSE151029
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsTang M et al., "FOXK1 Participates in DNA Damage Response by Controlling 53BP1 Function.", Cell Rep, 2020 Aug 11;32(6):108018
SubmissionRegistration date: 21-May-2020
UTHealth
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments16
Publications
PubMed1
PMC1
Other datasets
BioSample16
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes12
SRA Data Details
ParameterValue
Data volume, Gbases38
Data volume, Mbytes13221

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