Display Settings:

Format

Send to:

Choose Destination
Accession: PRJNA634378 ID: 634378

Differentially expressed SE-lncRNAs and mRNA in colorectal cancer (human)

See Genome Information for Homo sapiens
To address the role of SE-lncRNAs in CRC tumorigenesis, we performed Arraystar human SE-lncRNA microarray to profile the differentially expressed SE-lncRNAs and mRNA in four CRC and paired peritumoral tissues. According to the filter criteria of Fold Change ≥ 1.5 and P-value < 0.05, a total of 55 significantly upregulated and 29 significantly downregulated SE-LncRNs were identified. These data confirmed that the expression of SE-lncRNA undergoes a change that cannot be ignored during CRC tumorigenesis. We also identified 165 (91 up- and 74 downregulated) differentially expressed mRNA between the two groups(Fold Change > 1.5 and P-value < 0.05)(Fig.1C), which provides help for us to findpotential target genes and further explore the biological function of SE-lncRNA in CRC Overall design: Four CRC and paired peritumoral tissues were subjected to Arraystar human microarray analysis to determine differentially expressed SE-LncRNAs and mRNA. All experiment procedures were performed following the Arraystar standard protocol.
AccessionPRJNA634378; GEO: GSE151021
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
SubmissionRegistration date: 21-May-2020
Jiangsu Cancer Hospital
RelevanceMedical
Project Data:
Resource NameNumber
of Links
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Spots118344
Data volume, Processed Mbytes4
Data volume, Supplementary Mbytes6

Supplemental Content

Recent activity

  • Differentially expressed SE-lncRNAs and mRNA in colorectal cancer
    Differentially expressed SE-lncRNAs and mRNA in colorectal cancer
    Differentially expressed SE-lncRNAs and mRNA in colorectal cancer
    BioProject
  • Vitis vinifera
    Vitis vinifera
    Vitis vinifera Map
    BioProject
  • Mus musculus
    Mus musculus
    Intestinal SIRT1 in the regulation of intestinal tissue homeostasis
    BioProject
  • Homo sapiens
    Homo sapiens
    Neutrophils expressing lysyl oxidase-like 4 protein are present in colorectal cancer liver metastases resistant to anti-angiogenic therapy
    BioProject

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center