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Genome Information for Homo sapiens
To address the role of SE-lncRNAs in CRC tumorigenesis, we performed Arraystar human SE-lncRNA microarray to profile the differentially expressed SE-lncRNAs and mRNA in four CRC and paired peritumoral tissues. According to the filter criteria of Fold Change ≥ 1.5 and P-value < 0.05, a total of 55 significantly upregulated and 29 significantly downregulated SE-LncRNs were identified. These data confirmed that the expression of SE-lncRNA undergoes a change that cannot be ignored during CRC tumorigenesis. We also identified 165 (91 up- and 74 downregulated) differentially expressed mRNA between the two groups(Fold Change > 1.5 and P-value < 0.05)(Fig.1C), which provides help for us to findpotential target genes and further explore the biological function of SE-lncRNA in CRC
Overall design: Four CRC and paired peritumoral tissues were subjected to Arraystar human microarray analysis to determine differentially expressed SE-LncRNAs and mRNA. All experiment procedures were performed following the Arraystar standard protocol.
| Accession | PRJNA634378; GEO: GSE151021 |
| Data Type | Transcriptome or Gene expression |
| Scope | Multiisolate |
| Organism | Homo sapiens[Taxonomy ID: 9606] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens |
| Submission | Registration date: 21-May-2020 Jiangsu Cancer Hospital |
| Relevance | Medical |
Project Data:
| Resource Name | Number of Links |
|---|
| GEO DataSets | 1 |
GEO Data Details| Parameter | Value |
|---|
| Data volume, Spots | 118344 |
| Data volume, Processed Mbytes | 4 |
| Data volume, Supplementary Mbytes | 6 |