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Accession: PRJNA634150 ID: 634150

Sequencing 22G small RNAs in WT and zsp-1(-) animals

See Genome Information for Caenorhabditis elegans
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1494 additional projects are related by organism.
To explore how ZSP-1 (and therefore Z granules) might contribute to germline RNAi, we asked if zsp-1(-) animals were able to produce 22G siRNAs in response to dsRNA exposure. More...
AccessionPRJNA634150; GEO: GSE150960
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismCaenorhabditis elegans[Taxonomy ID: 6239]
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans
PublicationsWan G et al., "ZSP-1 is a Z granule surface protein required for Z granule fluidity and germline immortality in Caenorhabditis elegans.", EMBO J, 2021 Feb 1;40(3):e105612
Grants
  • "Small regulatory RNA functions in the nucleus" (Grant ID R01 GM088289, National Institute of General Medical Sciences)
  • "Spatiotemporal Regulation of Liquid-like Condensates in the Germline" (Grant ID R01 GM132286, National Institute of General Medical Sciences)
SubmissionRegistration date: 20-May-2020
Kennedy, Genetics, Harvard Medical School
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments8
Publications
PubMed1
PMC1
Other datasets
BioSample8
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes10
SRA Data Details
ParameterValue
Data volume, Gbases2
Data volume, Mbytes1143

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