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Accession: PRJNA628527 ID: 628527

PacBio transcriptomic sequencing of Scapharca broughtonii infected with Ostreid herpesvirus 1

To further understand the transcriptome complexity of Ostreid herpesvirus 1 and immune response of Scapharca broughtonii against the virus, transcriptomes of a sample collected at 60 hours after challenging with the virus, and sequenced with PacBio.
AccessionPRJNA628527
Data TypeRaw sequence reads
ScopeMultispecies
Publications
  • Published online: Bai C et al., "Paired miRNA and RNA sequencing provides a first insight into molecular defense mechanisms of Scapharca broughtonii during ostreid herpesvirus-1 infection", Fish & Shellfish Immunology, 2022;122:225-233
SubmissionRegistration date: 26-Apr-2020
Yellow Sea Fisheries Research Institute
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments2
Other datasets
BioSample2
SRA Data Details
ParameterValue
Data volume, Gbases84
Data volume, Mbytes21441

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