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Accession: PRJNA59571 ID: 59571

Oreochromis niloticus (Nile tilapia)

Oreochromis niloticus genome sequencing

See Genome Information for Oreochromis niloticus
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This project is a component of the NHGRI Large Scale Sequencing Program for Organismal Sequencing
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108 additional projects are related by organism.
149 additional projects are components of the NHGRI Large Scale Sequencing Program for Organismal Sequencing.
Sequenced and assembled at the Broad Institute. The sequenced animal (female) is derived from a clonal line of tilapia fish and was provided by Dr. David Penman at the University of Stirling Institute of Agriculture, Stirling, UK.
AccessionPRJNA59571
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismOreochromis niloticus[Taxonomy ID: 8128]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis; Oreochromis niloticus
PublicationsBrawand D et al., "The genomic substrate for adaptive radiation in African cichlid fish.", Nature, 2014 Sep 18;513(7518):375-381
SubmissionRegistration date: 28-Jan-2011
Broad Institute
Locus Tag PrefixES7
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)48950
WGS master1
SRA Experiments39
Publications
PubMed1
PMC1
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSChrsBioSampleTaxonomy
GCA_000188235.2ChromosomeAERX00000000
22
SAMN00117560
Oreochromis niloticus
SRA Data Details
ParameterValue
Data volume, Gbases293
Data volume, Tbytes0.68
Related RefSeq Project
PRJNA72943 : Oreochromis niloticus RefSeq Genome

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