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Accession: PRJNA575346 ID: 575346

RNA-seq analysis of control and CDK12-depleted ovarian cancer cells (human)

See Genome Information for Homo sapiens
We report the differential gene expression in control versus CDK12-depleted OVCAR-8 cells Overall design: Examination of mRNA profiles in two-independent CDK12 siRNA-transfected OVCAR-8 cells compared to control luciferase siRNA transfected cells. Three technical replicates per sample.
AccessionPRJNA575346; GEO: GSE138288
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsKanakkanthara A et al., "BRCA1 Deficiency Upregulates NNMT, Which Reprograms Metabolism and Sensitizes Ovarian Cancer Cells to Mitochondrial Metabolic Targeting Agents.", Cancer Res, 2019 Dec 1;79(23):5920-5929
SubmissionRegistration date: 2-Oct-2019
The Mayo Clinic
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments9
Publications
PubMed1
PMC1
Other datasets
BioSample9
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes11
SRA Data Details
ParameterValue
Data volume, Gbases138
Data volume, Mbytes30900

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