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Accession: PRJNA53919 ID: 53919

sea squirt metagenome

Ecteinascidia turbinata Hologenome

Genomic DNA (raw 454 reads) from the tunicate (Ecteinascidia turbinata) as well as any associated bacteria was isolated. Sequence reads include the associated endosymbiotic microbiome.
AccessionPRJNA53919
Data TypeMetagenome
ScopeEnvironment
Organismsea squirt metagenome[Taxonomy ID: 1041057]
unclassified sequences; metagenomes; organismal metagenomes; sea squirt metagenome
PublicationsRath CM et al., "Meta-omic characterization of the marine invertebrate microbial consortium that produces the chemotherapeutic natural product ET-743.", ACS Chem Biol, 2011 Nov 18;6(11):1244-56
SubmissionRegistration date: 11-Oct-2010
Center for Genomic Sciences
Locus Tag PrefixETU
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Genomic DNA)2
SRA Experiments1
Protein Sequences44
Publications
PubMed1
PMC1
Other datasets
BioSample1
SRA Data Details
ParameterValue
Data volume, Mbases65
Data volume, Mbytes139

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