ID 524186 - BioProject

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Accession: PRJNA524186 ID: 524186

Random assembly of gut microbiota sub-community in gnotobiotic chicken normalizes the gut and excludes enteric pathogen

The bacterial blend of chicken gut isolates can confer colonization resistance against the enteric pathogen and helps in normalization of the gut.

Accession	PRJNA524186
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 25-Feb-2019 South Dakota State University
Relevance	Industrial

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	10
SRA Experiments	40
Other datasets
BioSample	50
Assembly	10

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

10
10

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_012027855.1	SJOW00000000	SAMN11022474	SW536	Bacillus paralicheniformis
GCA_012027745.1	SJOV00000000	SAMN11022475	SW641	Enterococcus durans
GCA_012027865.1	SJOZ00000000	SAMN11022471	SW56	Faecalicoccus pleomorphus
GCA_012027835.1	SJOY00000000	SAMN11022472	SW282	Ligilactobacillus agilis
GCA_012027715.1	SJOR00000000	SAMN11022479	SW1139	Massilimicrobiota sp. SW1139
GCA_012027675.1	SJOQ00000000	SAMN11022480	SW1228	Megamonas funiformis
GCA_012027795.1	SJOT00000000	SAMN11022477	SW808	Megasphaera sp. SW808
GCA_012027725.1	SJOU00000000	SAMN11022476	SW781	Olsenella sp. SW781
GCA_012027765.1	SJOS00000000	SAMN11022478	SW1122	Pseudoflavonifractor sp. SW1122
GCA_012027815.1	SJOX00000000	SAMN11022473	SW396	Staphylococcus saprophyticus

SRA Data Details

Parameter	Value
Data volume, Gbases	3
Data volume, Mbytes	2205

Supplemental Content

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2910354795: Massiliomicrobiota sp. SW1139 [Integrated Microbial Genomes]
2910354795: Massiliomicrobiota sp. SW1139
Integrated Microbial Genomes
2911170331: Pseudoflavonifractor sp. SW1122 [Integrated Microbial Genomes]
2911170331: Pseudoflavonifractor sp. SW1122
Integrated Microbial Genomes
2911234957: Megasphaera sp. SW808 [Integrated Microbial Genomes]
2911234957: Megasphaera sp. SW808
Integrated Microbial Genomes

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Random assembly of gut microbiota sub-community in gnotobiotic chicken normalizes the gut and excludes enteric pathogen

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