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Accession: PRJNA524159 ID: 524159

Inferring dynamic regulatory programs in non-stationary expression time courses with applications to early human neural development (human)

See Genome Information for Homo sapiens
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66644 additional projects are related by organism.
We generated RNA-seq data to measure transcriptional profiles of twenty hPSC-derived NSC populations, representing distinct regions of the developing human hindbrain and rostral cervical spinal cord. More...
AccessionPRJNA524159; GEO: GSE127064
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsChasman D et al., "Inferring Regulatory Programs Governing Region Specificity of Neuroepithelial Stem Cells during Early Hindbrain and Spinal Cord Development.", Cell Syst, 2019 Aug 28;9(2):167-186.e12
Grants
  • "Computational Inference of Regulatory Network Dynamics on Cell Lineages" (Grant ID R01 GM117339, National Institute of General Medical Sciences)
SubmissionRegistration date: 25-Feb-2019
Wisconsin Institute for Discovery, Biomedical Engineering, University of Wisconsin Madison
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments59
Publications
PubMed1
PMC1
Other datasets
BioSample59
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes2
SRA Data Details
ParameterValue
Data volume, Gbases15
Data volume, Mbytes9475

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