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Accession: PRJNA523665 ID: 523665

4C on Sox2 Locus with tetO/cuO Modifications

This study was conducted to determine whether integration of cuO- and tetO-arrays into the mouse Sox2 genomic locus perturbation 3D structure of the locus as measured by 4C.
AccessionPRJNA523665
Data TypeRaw sequence reads
ScopeMultispecies
Grants
  • "Understanding the Role of Nuclear Architecture in Olfactory Receptor Choice" (Grant ID R01 DC013560, National Institute on Deafness and Other Communication Disorders)
  • "Cellular Decision Making" (Grant ID R35 GM118167, National Institute of General Medical Sciences)
  • "Computational design of Cas9-based molecular imaging reagents" (Grant ID R21 EB021453, National Institute of Biomedical Imaging and Bioengineering)
  • "A toolkit for visualizing and manipulating chromosomal interactions in living cells." (Grant ID R21 EB022787, National Institute of Biomedical Imaging and Bioengineering)
  • "Probing the Role of Enhancer-Promoter Interaction Dynamics in Transcriptional Control" (Grant ID 16POST309100006, American Heart Association)
SubmissionRegistration date: 21-Feb-2019
University of California, San Francisco
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments6
Other datasets
BioSample6
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes31
SRA Data Details
ParameterValue
Data volume, Gbases8
Data volume, Mbytes3129

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