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Accession: PRJNA523039 ID: 523039

Lecythidaceae (family of plants)

Target sequence capture in the Brazil nut family (Lecythidaceae): marker selection and in silico capture from genome skimming data

We generated twelve transcriptomes for ten species of the Brazil nut family (Lecythidaceae), identified a set of putatively orthologous nuclear loci and evaluated, in silico, their phylogenetic utility using published genome skimming data of 24 Lecythidaceae species. More...
AccessionPRJNA523039
Data TypeTranscriptome or Gene expression
ScopeMultispecies
PublicationsVargas OM et al., "Target sequence capture in the Brazil nut family (Lecythidaceae): Marker selection and in silico capture from genome skimming data.", Mol Phylogenet Evol, 2019 Jun;135:98-104
SubmissionRegistration date: 18-Feb-2019
University of Michigan
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (TSA master)7
SRA Experiments7
Publications
PubMed1
Other datasets
BioSample7
SRA Data Details
ParameterValue
Data volume, Gbases81
Data volume, Mbytes49690

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