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Accession: PRJNA522074 ID: 522074

Uncovering the hepatic gene expression variations and sex-differences as response to high-fat diet consumption in the highly genetically diversity of the Collaborative Cross mouse model (house mouse)

See Genome Information for Mus musculus
Hepatic gene expression variations and sex-differences due to high-fat diet consumption using the Collaborative Cross mouse model Overall design: 84 samples, Diabetic, Obese, or Healthy for each condition
AccessionPRJNA522074; GEO: GSE126490
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
Publications
  • Binenbaum I et al., "Container-aided integrative QTL and RNA-seq analysis of Collaborative Cross mice supports distinct sex-oriented molecular modes of response in obesity.", BMC Genomics, 2020 Nov 3;21(1):761
  • Abu-Toamih Atamni HJ et al., "Hepatic gene expression variations in response to high-fat diet-induced impaired glucose tolerance using RNAseq analysis in collaborative cross mouse population.", Mamm Genome, 2019 Oct;30(9-10):260-275
SubmissionRegistration date: 13-Feb-2019
National Hellenic Research Foundation
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments84
Publications
PubMed2
PMC1
Other datasets
BioSample84
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes102
SRA Data Details
ParameterValue
Data volume, Gbases258
Data volume, Tbytes0.13

Supplemental Content

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