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Accession: PRJNA521997 ID: 521997

Characterization of the DNA methylome in embryonic retina, retinal progenitors, and RGCs (house mouse)

See Genome Information for Mus musculus
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47588 additional projects are related by organism.
We investigated the dynamics of DNA methylation during differentiation of retinal progenitor cells (RPCs) into retinal neurons using the whole-genome bisulfite sequencing (WGBS) approach Overall design: To study DNA methylation, the WGBS libraries were prepared using DNA from embryonic-day (E) 11. More...
AccessionPRJNA521997; GEO: GSE126474
Data TypeEpigenomics
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsDvoriantchikova G et al., "DNA Methylation Dynamics During the Differentiation of Retinal Progenitor Cells Into Retinal Neurons Reveal a Role for the DNA Demethylation Pathway.", Front Mol Neurosci, 2019;12:182
SubmissionRegistration date: 12-Feb-2019
Ophthalmology, University of Miami Miller School of Medicine
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments5
Publications
PubMed1
PMC1
Other datasets
BioSample5
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes19326
SRA Data Details
ParameterValue
Data volume, Gbases398
Data volume, Tbytes0.17

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