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Accession: PRJNA521391 ID: 521391

Transcriptome analysis of cells carrying Type II Csp231I restriction-modification (RM) system reveal the crosstalk between two unrelated transcription factors - C protein and Rac prophage repressor

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Our transcriptome analysis supported by other in vivo and in vitro assays showed that C protein can directly silence the RacR repressor and thus affect the Rac prophage-related genes. More...
AccessionPRJNA521391; GEO: GSE126248
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismEscherichia coli[Taxonomy ID: 562]
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
PublicationsNegri A et al., "Transcriptome analyses of cells carrying the Type II Csp231I restriction-modification system reveal cross-talk between two unrelated transcription factors: C protein and the Rac prophage repressor.", Nucleic Acids Res, 2019 Oct 10;47(18):9542-9556
SubmissionRegistration date: 7-Feb-2019
Department of Plant Taxonomy and Nature Conservation, University of Gdansk
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments6
Publications
PubMed1
PMC1
Other datasets
BioSample6
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases64
Data volume, Mbytes32935

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