This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA521351; GEO: GSE126227 |
| Type | Umbrella project |
| Publications | Li Z et al., "N6-methyladenine in DNA antagonizes SATB1 in early development.", Nature, 2020 Jul;583(7817):625-630 |
| Grants | - "Investigate Novel Epigenetic Silencing Mechanisms in Mouse ESCs" (Grant ID R01 GM114205, National Institute of General Medical Sciences)
|
| Submission | Registration date: 7-Feb-2019
Andrew Xiao, Genetics, Yale Stem Cell Center |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 55 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 55 |
| GEO DataSets | 6 |
N6-methyladenine in DNA antagonizes SATB1 in early development encompasses the following 5 sub-projects:
| Project Type | Number of Projects |
| Epigenomics | 3 |
BioProject
accession | Organism | Title |
|---|
| PRJNA521354 | Mus musculus | N6-methyladenine in DNA antagonizes SATB1 in early development [ATAC-seq] (Andrew Xiao, Genetics, Yale...) | | PRJNA521355 | Mus musculus | N6-methyladenine in DNA antagonizes SATB1 in early development [ChIP-seq] (Andrew Xiao, Genetics, Yale...) | | PRJNA521356 | Mus musculus | N6-methyladenine in DNA antagonizes SATB1 in early development [MeDIP-seq] (Andrew Xiao, Genetics, Yale...) |
|
| Transcriptome or Gene expression | 2 |
BioProject
accession | Organism | Title |
|---|
| PRJNA521353 | Mus musculus | N6-methyladenine in DNA antagonizes SATB1 in early development [RNA-seq] (Andrew Xiao, Genetics, Yale...) | | PRJNA577111 | Mus musculus | N6-methyladenine in DNA antagonizes SATB1 in early development [Maternal-fetal interface RNA-seq] (Andrew Xiao, Genetics, Yale...) |
|