See
Genome Information for Homo sapiens
We optimized the SHAPE-MaP (selective 2'-hydroxyl acylation analyzed by primer extension and mutational profiling) assay to analyze structures of paired circular (circSHAPE-MaP) and linear (linearSHAPE-MaP) RNAs.
Overall design: CircSHAPE-MaP and linearSHAPE-MaP for circRNA and linear RNA secondary structure.
| Accession | PRJNA521266; GEO: GSE126195 |
| Scope | Multiisolate |
| Organism | Homo sapiens[Taxonomy ID: 9606] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens |
| Publications | Liu CX et al., "Structure and Degradation of Circular RNAs Regulate PKR Activation in Innate Immunity.", Cell, 2019 May 2;177(4):865-880.e21 |
| Submission | Registration date: 6-Feb-2019
CAS-MPG Partner Institute for Computational Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences |
| Relevance | Medical |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 46 |
| Publications |
| PubMed | 1 |
| Other datasets |
| BioSample | 46 |
| GEO DataSets | 1 |