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Accession: PRJNA521148 ID: 521148

Genome-wide mapping of CASZ1b binding sites and investigate its effect on chromatin status in SMS-CTR cells [CTRtetCASZ1b] (human)

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This project is a component of the CASZ1 directly regulates expression of myogenic genes through regional epigenetic modifications to induce muscle and rhabdomyosarcoma cell differentiation
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6 additional projects are components of the CASZ1 directly regulates expression of myogenic genes through regional epigenetic modifications to induce muscle and rhabdomyosarcoma cell differentiation.
66644 additional projects are related by organism.
In SMS-CTR cells, we identified genomewide binding sites of CASZ1b. The overexpression of CASZ1b in SMS-CTR cells led to a regional epigenetic modification. More...
AccessionPRJNA521148; GEO: GSE126142
Data TypeEpigenomics
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsLiu Z et al., "CASZ1 induces skeletal muscle and rhabdomyosarcoma differentiation through a feed-forward loop with MYOD and MYOG.", Nat Commun, 2020 Feb 14;11(1):911
SubmissionRegistration date: 6-Feb-2019
POB, NCI
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments14
Publications
PubMed1
PMC1
Other datasets
BioSample14
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1821
SRA Data Details
ParameterValue
Data volume, Gbases37
Data volume, Mbytes13745

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