ID 521119 - BioProject

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Accession: PRJNA521119 ID: 521119

Sequencing Human and Canine Bacteremia Staphylococcus pseudintermedius isolates

We sequenced 8 Staphylococcus pseudintermedius isolates (4 from human bacteremia infections, 4 from canine bacteremia infections) with both MinION and MiSeq, in order to create complete whole-genome hybrid assemblies. More...

Accession	PRJNA521119
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 6-Feb-2019 Texas A&M University
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	17
WGS master	4
Genomic DNA	4
SRA Experiments	24
Protein Sequences	18393
Other datasets
BioSample	8
Assembly	8

Assembly details:

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Assembly level

Number of Assemblies

Chromosome

Scaffold

Total

4
4
8

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_004322615.1	SEZX00000000		SAMN10880483	53_58	Staphylococcus pseudintermedius
GCA_004322625.1	SEZW00000000		SAMN10880485	53_63	Staphylococcus pseudintermedius
GCA_004320075.1	SEZY00000000		SAMN10880481	50_21	Staphylococcus pseudintermedius
GCA_004320065.1	SEZZ00000000		SAMN10880479	46_57	Staphylococcus pseudintermedius
GCA_004307335.1		1	SAMN10880486	53_88	Staphylococcus pseudintermedius
GCA_004307355.1		1	SAMN10880484	53_60	Staphylococcus pseudintermedius
GCA_004307395.1		1	SAMN10880480	49_44	Staphylococcus pseudintermedius
GCA_004307375.1		1	SAMN10880482	51_92	Staphylococcus pseudintermedius

SRA Data Details

Parameter	Value
Data volume, Gbases	12
Data volume, Mbytes	9615

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2925952916: Staphylococcus pseudintermedius 51_92 [Integrated Microbial Genomes]
2925952916: Staphylococcus pseudintermedius 51_92
Integrated Microbial Genomes
2880426429: Staphylococcus pseudintermedius 53_60 [Integrated Microbial Genomes]
2880426429: Staphylococcus pseudintermedius 53_60
Integrated Microbial Genomes

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Sequencing Human and Canine Bacteremia Staphylococcus pseudintermedius isolates

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