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Accession: PRJNA520938 ID: 520938

Proteogenomic Landscape of Squamous Cell Lung Cancer (human)

See Genome Information for Homo sapiens
To provide a detailed analysis on how genomic and transcriptomic alterations related to proteome level changes in squamous cell lung cancer (SCC), we performed an integrated analysis incorporating DNA copy number, somatic mutations, expression RNA-sequencing, and expression proteomics in 108 SCC nested within clinical outcome, tumor pathology, and other clinically relevant data.
AccessionPRJNA520938; dbGaP: phs001781
Data TypePhenotype or Genotype
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
SubmissionRegistration date: 4-Feb-2019
H. LEE MOFFITT CANCER CTR & RES INST
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments216
Other datasets
BioSample108
Genotype and Phenotype (dbGaP)1
SRA Data Details
ParameterValue
Data volume, Gbases1,599
Data volume, Tbytes0.66

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