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Accession: PRJNA518727 ID: 518727

freshwater metagenome

Water column metagenomes from two Canadian Boreal Shield lakes

Following initial 16S rRNA gene amplicon sequencing (BioProject PRJNA354806), six selected genomic DNA samples collected from the anoxic zones of Lakes 227 and 442 (International Institute for Sustainable Development Experimental Lakes Area, AKA IISD-ELA; near Kenora, Ontario, Canada) were re-analyzed by metagenomic sequencing. More...
AccessionPRJNA518727
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismfreshwater metagenome[Taxonomy ID: 449393]
unclassified sequences; metagenomes; ecological metagenomes; freshwater metagenome
PublicationsTsuji JM et al., "Anoxygenic photosynthesis and iron-sulfur metabolic potential of Chlorobia populations from seasonally anoxic Boreal Shield lakes.", ISME J, 2020 Nov;14(11):2732-2747
SubmissionRegistration date: 24-May-2019
University of Waterloo
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)546
WGS master13
SRA Experiments6
Protein Sequences8329
Publications
PubMed1
PMC1
Other datasets
BioSample13
Assembly13
Assembly details:
SRA Data Details
ParameterValue
Data volume, Gbases72
Data volume, Mbytes37006

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