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Accession: PRJNA517649 ID: 517649

RNA_Seq analysis of localization along animal-vegetal axis of Acipenser ruthenus (sterlet)

See Genome Information for Acipenser ruthenus
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7 additional projects are related by organism.
We performed cryosectioning of oocytes along the animal-vegetal axis (first developmental axis, section A (first animal) to section E (last vegetal), followed by RNA-Seq to determine the localization profiles of coding and noncoding RNAs. More...
AccessionPRJNA517649; GEO: GSE125819
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismAcipenser ruthenus[Taxonomy ID: 7906]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser; Acipenser ruthenus
PublicationsNaraine R et al., "NormQ: RNASeq normalization based on RT-qPCR derived size factors.", Comput Struct Biotechnol J, 2020;18:1173-1181
SubmissionRegistration date: 29-Jan-2019
Laboratory of Gene Expression, Institute of Biotechnology, Czech Academy of Science, v.v.i.
RelevanceUnknown
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments15
Publications
PubMed1
PMC1
Other datasets
BioSample15
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes22
SRA Data Details
ParameterValue
Data volume, Gbases43
Data volume, Mbytes15451

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