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Accession: PRJNA517121 ID: 517121

Study of MeCP2 occupancy and biniding localization in the genome (human)

See Genome Information for Homo sapiens
MeCP2 ChIP-seq was performed to study localisation of MeCP2 in the genome and to confirm binding to mCG. More...
AccessionPRJNA517121; GEO: GSE125659
Data TypeEpigenomics
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
Publications
  • Connelly JC et al., "Absence of MeCP2 binding to non-methylated GT-rich sequences in vivo.", Nucleic Acids Res, 2020 Apr 17;48(7):3542-3552
  • Cholewa-Waclaw J et al., "Quantitative modelling predicts the impact of DNA methylation on RNA polymerase II traffic.", Proc Natl Acad Sci U S A, 2019 Jul 23;116(30):14995-15000
SubmissionRegistration date: 25-Jan-2019
Bioinformatics Core Facility, Wellcome Trust Centre for Cell Biology, University of Edinburgh
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments16
Publications
PubMed2
PMC2
Other datasets
BioSample16
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes8336
SRA Data Details
ParameterValue
Data volume, Gbases178
Data volume, Tbytes0.12

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