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Accession: PRJNA516701 ID: 516701

Rectal swabs in critically-ill patients provide discordant representations of the gut microbiome compared to stool samples

Dysbiosis of gut microbial communities has been proposed to contribute to the evolution and outcome of critical illness, but the actual mechanisms have not been fully characterized. More...
AccessionPRJNA516701
Data TypeRaw sequence reads
ScopeMultispecies
Grants
  • "Microbiome-based diagnosis of pneumonia in the acute respiratory distress syndrome" (Grant ID K23 HL139987, National Heart, Lung, and Blood Institute)
  • "Mentoring and Patient-Oriented Research in HIV Obstructive Lung Disease" (Grant ID K24 HL123342, National Heart, Lung, and Blood Institute)
  • "Cardiolipin as a Novel Mediator of Acute Lung Injury" (Grant ID P01 HL114453, National Heart, Lung, and Blood Institute)
  • "Mechanisms of Lung Homeostasis by F box Proteins" (Grant ID R01 HL097376, National Heart, Lung, and Blood Institute)
  • "Pathogenesis of Obstruction/Emphysema and the Microbiome (POEM) in HIV" (Grant ID U01 HL098962, National Heart, Lung, and Blood Institute)
SubmissionRegistration date: 23-Jan-2019
University of Pittsburgh
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments171
Other datasets
BioSample171
SRA Data Details
ParameterValue
Data volume, Gbases8
Data volume, Mbytes5082

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