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Accession: PRJNA516647 ID: 516647

RNA-Seq analysis of human Tr1, Tregs and IL10neg cells (human)

See Genome Information for Homo sapiens
To determine the differentially expressed genes between these subsets and identify the core human in vivo differentiated Tr1 cell gene signature Overall design: Human Tr1 and IL-10 neg cells were sorted using an IL-10capture assay following 16h CD3/CD28 bead activation, matched Tregs were sorted from unstimulated cells then activated by CD3/CD28 beads for 16h. Samples are from 3 donors from 3 independent experiments (HIF037, HIF038 and HIF039).
AccessionPRJNA516647; GEO: GSE125504
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsCook L et al., "Suppressive and Gut-Reparative Functions of Human Type 1 T Regulatory Cells.", Gastroenterology, 2019 Dec;157(6):1584-1598
SubmissionRegistration date: 23-Jan-2019
University of British Columbia
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments9
Publications
PubMed1
Other datasets
BioSample9
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes2
SRA Data Details
ParameterValue
Data volume, Gbases22
Data volume, Mbytes9479

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