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Accession: PRJNA516436 ID: 516436

mRNA-seq of wild-type or Otud1 deficient primary bone marrow derived macrophages (BMDM) after herpes simplex virus-1 or sendai virus infection (house mouse)

See Genome Information for Mus musculus
Analysis of mRNA-seq of wild type bone marrow derived macrophages reveals how wild-type and Otud1 deficient bone marrow derived macrophages response to HSV-1 or SeV infection Overall design: Primary bone marrow derived macrophages generated from bone marrow of WT or Otud1 knock out C57BL/6 mice were infected by HSV-1 or SeV for 0 or 6 hours, respectively.
AccessionPRJNA516436; GEO: GSE125462
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
SubmissionRegistration date: 22-Jan-2019
Institude of Systems Biomedicine
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments6
Other datasets
BioSample6
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases59
Data volume, Mbytes18627

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