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Accession: PRJNA516216 ID: 516216

mRNA polyadenylation profile analysis in control and U1 AMO treated HeLa cells (human)

See Genome Information for Homo sapiens
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66644 additional projects are related by organism.
To globally assess the effect of polyadenylation site (PAS) usage upon functional knockdown of U1 snRNP, we carried out PAS-seq analysis with control and U1 AMO-treated HeLa cells using the QuantSeq Rev 3' mRNA sequencing library prep kit (Cat. More...
AccessionPRJNA516216; GEO: GSE125397
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsShi J et al., "Suboptimal RNA-RNA interaction limits U1 snRNP inhibition of canonical mRNA 3' processing.", RNA Biol, 2019 Oct;16(10):1448-1460
SubmissionRegistration date: 21-Jan-2019
school of medicine, sysu
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments4
Publications
PubMed1
PMC1
Other datasets
BioSample4
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes5
SRA Data Details
ParameterValue
Data volume, Gbases67
Data volume, Mbytes30838

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