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Accession: PRJNA515609 ID: 515609

Comparative analysis of gene expression in tomato roots during mild and severe potato spindle tuber viroid infection. [roots RNA-seq] (tomato)

See Genome Information for Solanum lycopersicum
Comparative analysis of gene expression in tomato roots during mild and severe potato spindle tuber viroid infection. More...
AccessionPRJNA515609; GEO: GSE125228
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismSolanum lycopersicum[Taxonomy ID: 4081]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon; Solanum lycopersicum
PublicationsGóra-Sochacka A et al., "Root Transcriptomic Analysis Reveals Global Changes Induced by Systemic Infection of Solanum lycopersicum with Mild and Severe Variants of Potato Spindle Tuber Viroid.", Viruses, 2019 Oct 29;11(11)
SubmissionRegistration date: 17-Jan-2019
Institute of Biochemistry and Biophysics, PAS
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments9
Publications
PubMed1
PMC1
Other datasets
BioSample9
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes5
SRA Data Details
ParameterValue
Data volume, Gbases26
Data volume, Mbytes19893

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