This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA515608; GEO: GSE125232 |
| Type | Umbrella project |
| Publications | Morral C et al., "Zonation of Ribosomal DNA Transcription Defines a Stem Cell Hierarchy in Colorectal Cancer.", Cell Stem Cell, 2020 Jun 4;26(6):845-861.e12 |
| Submission | Registration date: 17-Jan-2019
Biostatistics and Bioinformatics Unit, IRB Barcelona |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 9 |
| Publications |
| PubMed | 1 |
| Other datasets |
| BioSample | 9 |
| GEO DataSets | 5 |
GEO Data Details| Parameter | Value |
|---|
| Data volume, Spots | 1974880 |
| Data volume, Processed Mbytes | 37 |
| Data volume, Supplementary Mbytes | 83 |
| Parameter | Value |
|---|
| Data volume, Gbases | 14 |
| Data volume, Mbytes | 6847 |
A cancer stem cell hierarchy based on differential ribosomal RNA and protein synthesis capacities encompasses the following 4 sub-projects:
| Project Type | Number of Projects |
| Transcriptome or Gene expression | 4 |
BioProject
accession | Organism | Title |
|---|
| PRJNA515612 | Homo sapiens | A cancer stem cell hierarchy based on differential ribosomal RNA and protein synthesis capacities [EPHB2] (Biostatistics and Bioinformatics...) | | PRJNA515613 | Homo sapiens | A cancer stem cell hierarchy based on differential ribosomal RNA and protein synthesis capacities [POLR1A] (Biostatistics and Bioinformatics...) | | PRJNA607725 | Homo sapiens | Transcriptomic comparison between LGR5 and POLI double tumor cell populations in CRC (Biostatistics and Bioinformatics...) | | PRJNA624033 | Mus musculus | RNA-seq of AKP organoids over different stages of differentiation (Biostatistics and Bioinformatics...) |
|